WormBase Tree Display for Variation: WBVar00093479

WBVar00093479 Name: Public_name: ok2324
    HGVSg: CHROMOSOME_II:g.6197826_6198891del
  Sequence_details: SMap: S_parent: Sequence: C30B5
    Flanking_sequences: tccaattcagatagcaaacagtgcatgctt ggtatctttagttttatttaaaatttatgg
    Mapping_target: C30B5
    Type_of_mutation: Deletion
    PCR_product: ok2324_external
      ok2324_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036836
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00077732
      WBGene00016244
    Transcript: C30B5.1.1 VEP_consequence: splice_region_variant,coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: LOW
        cDNA_position: ?-196
        CDS_position: ?-102
        Protein_position: ?-34
        Exon_number: 1-2/11
      C30B5.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 352-?
        CDS_position: 297-?
        Protein_position: 99-?
        Intron_number: 6/6
        Exon_number: 5-7/7
      C30B5.2b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 339-?
        CDS_position: 291-?
        Protein_position: 97-?
        Intron_number: 6/6
        Exon_number: 5-7/7
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele