WormBase Tree Display for Variation: WBVar00093732

WBVar00093732 Name: Public_name: ok2617
    Other_name: K05F1.5.1:c.158+431_334delinsCATATTTTTTGTTAAAT
    HGVSg: CHROMOSOME_II:g.5791784_5793023delinsCATATTTTTTGTTAAAT
  Sequence_details: SMap: S_parent: Sequence: K05F1
    Flanking_sequences: ccatttgtcgtcaggaacattggctagaaa tgcacatatcttctgttaaattgtcctttt
    Mapping_target: K05F1
    Type_of_mutation: Insertion: CATATTTTTTGTTAAAT
      Deletion
    PCR_product: ok2617_external
      ok2617_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032667
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019407
      WBGene00271818
    Transcript: K05F1.14.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-283
        CDS_position: ?-219
        Protein_position: ?-73
        Intron_number: 2/3
        Exon_number: 1-3/4
      K05F1.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K05F1.5.1:c.158+431_334delinsCATATTTTTTGTTAAAT
        cDNA_position: ?-348
        CDS_position: ?-334
        Protein_position: ?-112
        Intron_number: 3-4/8
        Exon_number: 4-5/9
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele