WormBase Tree Display for Variation: WBVar00094370

WBVar00094370 Name: Public_name: ok3339
    Other_name: F52F12.1a.1:c.797+120_1205del
      F52F12.1b.1:c.746+120_1154del
    HGVSg: CHROMOSOME_I:g.9889246_9889941del
  Sequence_details: SMap: S_parent: Sequence: F52F12
    Flanking_sequences: cattgaagtagaggccaaacaacgaaatat tctgaattaaaaatgcttaattcagaagtg
    Mapping_target: F52F12
    Type_of_mutation: Deletion
    PCR_product: ok3339_external
      ok3339_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037469
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003842
    Transcript: F52F12.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F52F12.1a.1:c.797+120_1205del
        cDNA_position: ?-1250
        CDS_position: ?-1205
        Protein_position: ?-402
        Intron_number: 9-11/14
        Exon_number: 10-12/15
      F52F12.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F52F12.1b.1:c.746+120_1154del
        cDNA_position: ?-1187
        CDS_position: ?-1154
        Protein_position: ?-385
        Intron_number: 8-10/13
        Exon_number: 9-11/14
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele