WormBase Tree Display for Variation: WBVar00095025
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| WBVar00095025 | Evidence | Paper_evidence | WBPaper00031000 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ox374 | |||||
| Other_name | CE41563:p.Gln2852Ter | ||||||
| CE43592:p.Gln2890Ter | |||||||
| CE47217:p.Gln2822Ter | |||||||
| F25C8.3a.1:c.8554C>T | |||||||
| CE47117:p.Gln2831Ter | |||||||
| F25C8.3b.1:c.8491C>T | |||||||
| F25C8.3c.1:c.8464C>T | |||||||
| CE47428:p.Gln2787Ter | |||||||
| F25C8.3e.1:c.8359C>T | |||||||
| F25C8.3d.1:c.8668C>T | |||||||
| HGVSg | CHROMOSOME_V:g.20896927C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F25C8 | |||
| Flanking_sequences | aaagatctgtcacaatgcttgacagtcatg | aaaatgcaatttcacctccgcttgtaaaac | |||||
| Mapping_target | F25C8 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00031000 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | EG | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006812 | |||||
| Transcript | F25C8.3d.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F25C8.3d.1:c.8668C>T | ||||||
| HGVSp | CE43592:p.Gln2890Ter | ||||||
| cDNA_position | 8668 | ||||||
| CDS_position | 8668 | ||||||
| Protein_position | 2890 | ||||||
| Exon_number | 33/37 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| F25C8.3b.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | F25C8.3b.1:c.8491C>T | ||||||
| HGVSp | CE47117:p.Gln2831Ter | ||||||
| cDNA_position | 8744 | ||||||
| CDS_position | 8491 | ||||||
| Protein_position | 2831 | ||||||
| Exon_number | 31/36 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| F25C8.3e.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | F25C8.3e.1:c.8359C>T | ||||||
| HGVSp | CE47428:p.Gln2787Ter | ||||||
| cDNA_position | 8359 | ||||||
| CDS_position | 8359 | ||||||
| Protein_position | 2787 | ||||||
| Exon_number | 29/34 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| F25C8.3c.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | F25C8.3c.1:c.8464C>T | ||||||
| HGVSp | CE47217:p.Gln2822Ter | ||||||
| cDNA_position | 8464 | ||||||
| CDS_position | 8464 | ||||||
| Protein_position | 2822 | ||||||
| Exon_number | 31/35 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| F25C8.3a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | F25C8.3a.1:c.8554C>T | ||||||
| HGVSp | CE41563:p.Gln2852Ter | ||||||
| cDNA_position | 8554 | ||||||
| CDS_position | 8554 | ||||||
| Protein_position | 2852 | ||||||
| Exon_number | 32/37 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | V | 25.6129 | ||||
| Reference | WBPaper00031000 | ||||||
| Method | Substitution_allele |
