WormBase Tree Display for Variation: WBVar00108724

WBVar00108724 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00108724
    Other_name: cbs44245
      cb44245 Paper_evidence: WBPaper00055507
    HGVSg: chrI:g.5610620G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0071d
    Flanking_sequences: gtagatatgtaaaaatggcgatggctggtcgtggaatgtctcctactaaa aggaaaccgacacattcattaagatcgtcacagaatttcatgagaaaaat
    Mapping_target: cb25.fpc0071d
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: AGCT AluI 613 279 92 12 4
        RGCY CviJI, CviTI 244 207 179 149 65 61 27 26 15 12 11 4
        CAGCTG PvuII 988 12
      Polymorphic_strain_digest: AGCT AluI 613 279 104 4
        RGCY CviJI, CviTI 244 207 179 149 77 61 27 26 15 11 4
        CAGCTG PvuII 1000
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00026504
    Transcript: CBG03700.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG03700.1:c.331G>A
        HGVSp: CBP14803.1:p.Glu111Lys
        cDNA_position: 331
        CDS_position: 331
        Protein_position: 111
        Exon_number: 3/13
        Codon_change: Gag/Aag
        Amino_acid_change: E/K
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP