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WormBase Tree Display for Variation: WBVar00143011

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Name Class

WBVar00143011EvidencePaper_evidenceWBPaper00030788
NamePublic_namee177
Other_nameCE27791:p.Trp124Ter
C04F5.3.1:c.372G>A
HGVSgCHROMOSOME_V:g.5098362C>T
Sequence_detailsSMapS_parentSequenceC04F5
Flanking_sequencesgcgtgcaaagcgccttgatgaattgagatgcaattgaacaaagtgatctacgaggaaaaa
Mapping_targetC04F5
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00030788
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000484
WBStrain00000511
WBStrain00000512
WBStrain00000513
WBStrain00000515
WBStrain00000517
WBStrain00000518
WBStrain00000519
WBStrain00000520
WBStrain00000521
WBStrain00000522
WBStrain00000523
WBStrain00000524
WBStrain00000525
WBStrain00000526
WBStrain00000528
WBStrain00000530
WBStrain00000531
WBStrain00000535
WBStrain00000536
WBStrain00000537
WBStrain00000538
WBStrain00000539
WBStrain00000540
WBStrain00000543
WBStrain00000544
WBStrain00000545
WBStrain00000546
WBStrain00000547
WBStrain00000548
WBStrain00000586
WBStrain00000587
WBStrain00000588
WBStrain00000589
WBStrain00000590
WBStrain00000591
WBStrain00000592
WBStrain00000593
WBStrain00000594
WBStrain00000595
WBStrain00000596
WBStrain00000597
WBStrain00000611
WBStrain00000612
WBStrain00000613
WBStrain00000614
WBStrain00000615
WBStrain00000616
WBStrain00000617
WBStrain00000618
WBStrain00000619
WBStrain00000620
WBStrain00000621
WBStrain00000622
WBStrain00000623
WBStrain00000624
WBStrain00000625
WBStrain00000635
WBStrain00000636
WBStrain00000642
WBStrain00000643
WBStrain00000644
WBStrain00000645
WBStrain00000646
WBStrain00000647
WBStrain00000648
WBStrain00000649
WBStrain00000650
WBStrain00000651
WBStrain00000652
WBStrain00000653
WBStrain00000654
WBStrain00000658
WBStrain00000659
WBStrain00000676
WBStrain00000677
WBStrain00000678
WBStrain00000679
WBStrain00000680
WBStrain00000681
WBStrain00000682
WBStrain00000683
WBStrain00000684
WBStrain00000685
WBStrain00000687
WBStrain00000688
WBStrain00000689
WBStrain00000690
WBStrain00000691
WBStrain00000692
WBStrain00000693
WBStrain00000694
WBStrain00000695
WBStrain00000696
WBStrain00000697
WBStrain00000698
WBStrain00000699
WBStrain00000700
WBStrain00000701
WBStrain00000702
WBStrain00000703
WBStrain00000704
WBStrain00000705
WBStrain00000706
WBStrain00000707
WBStrain00000709
WBStrain00000710
WBStrain00000711
WBStrain00000713
WBStrain00000714
WBStrain00000715
WBStrain00000716
WBStrain00000717
WBStrain00000719
WBStrain00000720
WBStrain00000721
WBStrain00000722
WBStrain00000723
WBStrain00000724
WBStrain00000725
WBStrain00000726
WBStrain00000727
WBStrain00000728
WBStrain00000729
WBStrain00000730
WBStrain00000731
WBStrain00000732
WBStrain00000734
WBStrain00000735
WBStrain00000736
WBStrain00000737
WBStrain00000738
WBStrain00000739
WBStrain00000742
WBStrain00000743
WBStrain00000744
WBStrain00000745
WBStrain00000746
WBStrain00000747
WBStrain00000751
WBStrain00000818
WBStrain00003995
WBStrain00004117
WBStrain00004952
WBStrain00004954
WBStrain00004990
WBStrain00004999
WBStrain00005653
WBStrain00005654
WBStrain00008003
WBStrain00008004
WBStrain00023971
WBStrain00023972
WBStrain00023976
WBStrain00023978
WBStrain00023979
WBStrain00023980
WBStrain00023981
WBStrain00023982
WBStrain00024119
WBStrain00027611
WBStrain00030594
WBStrain00040664
LaboratoryCB
StatusLive
AffectsGeneWBGene00006782
TranscriptC04F5.3.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC04F5.3.1:c.372G>A
HGVSpCE27791:p.Trp124Ter
cDNA_position494
CDS_position372
Protein_position124
Exon_number5/9
Codon_changetgG/tgA
Amino_acid_changeW/*
GeneticsInterpolated_map_positionV-2.51992
Mapping_dataIn_2_point126
314
1765
1766
1767
1768
1769
1770
1771
1772
2843
2881
3075
3273
3438
3455
3456
3457
3458
3459
3571
3572
4443
4444
4445
4446
4447
In_multi_point137
139
268
451
481
641
658
883
884
886
1144
1149
1184
1302
1533
1559
1560
1806
2270
2412
2415
2418
2419
5463
In_pos_neg_data845
2134
3076
3259
DescriptionPhenotypeWBPhenotype:0000229Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarkslightly smallPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000563Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarkshrinker contracts both dorsally and ventrally when proddedPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
Ease_of_scoringES3_Easy_to_scorePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000643Paper_evidenceWBPaper00000031
WBPaper00001474
Curator_confirmedWBPerson48
WBPerson712
RemarkUncPaper_evidenceWBPaper00001474
Curator_confirmedWBPerson712
WBPhenotype:0000646Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarkslow, good forward movementPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0001005Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarkpoor backingPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
ReferenceWBPaper00029020
WBPaper00001474
WBPaper00000031
WBPaper00014148
WBPaper00022021
WBPaper00025822
RemarkSite of e177 lesion was estimated from figure 1; actual coordinates are not provided in the paper.Paper_evidenceWBPaper00030788
MethodSubstitution_allele