WormBase Tree Display for Variation: WBVar00145096
expand all nodes | collapse all nodes | view schema
WBVar00145096 | Evidence | Paper_evidence | WBPaper00002306 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | ed9 | |||||
Other_name | M142.1b.1:c.113-1G>A | ||||||
M142.1c.1:c.248-1G>A | |||||||
M142.1a.1:c.173-1G>A | |||||||
HGVSg | CHROMOSOME_III:g.10907779G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | M142 | |||
Flanking_sequences | ctccacgtggacaaacatatcaaattttca | gattcctatgctccccatcggcaaacgtct | |||||
Mapping_target | M142 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00002306 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00003872 | ||||||
WBStrain00005633 | |||||||
WBStrain00005635 | |||||||
WBStrain00006687 | |||||||
WBStrain00008383 | |||||||
WBStrain00008384 | |||||||
WBStrain00008385 | |||||||
WBStrain00050636 | |||||||
WBStrain00050637 | |||||||
WBStrain00054881 | |||||||
Laboratory | DP | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006843 | |||||
Transcript | M142.1a.1 | VEP_consequence | splice_acceptor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | M142.1a.1:c.173-1G>A | ||||||
Intron_number | 3/5 | ||||||
M142.1c.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | M142.1c.1:c.248-1G>A | ||||||
Intron_number | 4/6 | ||||||
M142.1b.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | M142.1b.1:c.113-1G>A | ||||||
Intron_number | 1/3 | ||||||
Genetics | Interpolated_map_position | III | 5.59016 | ||||
Description | Phenotype | WBPhenotype:0000137 | Paper_evidence | WBPaper00002306 | |||
Curator_confirmed | WBPerson48 | ||||||
Remark | impedes production of normal UNC-119 message | Paper_evidence | WBPaper00002306 | ||||
Curator_confirmed | WBPerson48 | ||||||
Reference | WBPaper00002306 | ||||||
Method | Substitution_allele |