WormBase Tree Display for Variation: WBVar00145580

WBVar00145580 Name: Public_name: gk173
    Other_name: Y113G7A.8a.1:c.592+447_889+214del
      Y113G7A.8b.1:c.592+447_889+214del
    HGVSg: CHROMOSOME_V:g.20082883_20084825del
  Sequence_details: SMap: S_parent: Sequence: Y113G7A
    Flanking_sequences: attttttaaaaacctttataataatttttt cattattgttatttttcaaaaactttagaa
    Mapping_target: Y113G7A
    Type_of_mutation: Deletion
    PCR_product: gk173_external
      gk173_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035603
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00201195
      WBGene00001485
    Transcript: Y113G7A.8b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y113G7A.8b.1:c.592+447_889+214del
        Intron_number: 4-6/11
        Exon_number: 5-6/12
      Y113G7A.8a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y113G7A.8a.1:c.592+447_889+214del
        Intron_number: 4-6/11
        Exon_number: 5-6/12
      Y113G7A.20 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 4325
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele