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WormBase Tree Display for Variation: WBVar00180265

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Name Class

WBVar00180265NamePublic_nameWBVar00180265
Other_namepas29278
haw47541
haw146314
cewivar00025908
Y41C4A.4c.1:c.116+40C>A
Y41C4A.4b.1:c.149+40C>A
Y41C4A.4a.1:c.149+40C>A
Y41C4A.4e.1:c.92+40C>A
Y41C4A.4d.1:c.167+40C>A
HGVSgCHROMOSOME_III:g.11676537C>A
Sequence_detailsSMapS_parentSequenceY41C4A
Flanking_sequencestttgaagatgttaaaatataagaaaaagtatttgaaaagctgaaaaatgt
Mapping_targetY41C4A
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (37)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00566179
WBVar01270421
WBVar00217502
WBVar01335535
StatusLive
AffectsGeneWBGene00000793
TranscriptY41C4A.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4e.1:c.92+40C>A
Intron_number3/8
Y41C4A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4b.1:c.149+40C>A
Intron_number2/6
Y41C4A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4a.1:c.149+40C>A
Intron_number3/8
Y41C4A.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4d.1:c.167+40C>A
Intron_number3/8
Y41C4A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4c.1:c.116+40C>A
Intron_number2/6
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw47541
MethodWGS_Hawaiian_Waterston