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WormBase Tree Display for Variation: WBVar00180276

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Name Class

WBVar00180276NamePublic_nameWBVar00180276
Other_namepas29286
haw47552
haw146322
cewivar00025928
Y41C4A.4c.1:c.117-2536T>C
Y41C4A.4b.1:c.150-2536T>C
Y41C4A.4e.1:c.93-2536T>C
Y41C4A.4d.1:c.168-2536T>C
Y41C4A.4a.1:c.150-2536T>C
HGVSgCHROMOSOME_III:g.11682674T>C
Sequence_detailsSMapS_parentSequenceY41C4A
Flanking_sequencesttttggaattttttctgaactagttggattttgcggtgtcaattaaagtt
Mapping_targetY41C4A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (35)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00566187
WBVar01335544
WBVar01270431
WBVar00217510
StatusLive
AffectsGeneWBGene00000793
TranscriptY41C4A.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4e.1:c.93-2536T>C
Intron_number3/8
Y41C4A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4b.1:c.150-2536T>C
Intron_number2/6
Y41C4A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4a.1:c.150-2536T>C
Intron_number3/8
Y41C4A.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4d.1:c.168-2536T>C
Intron_number3/8
Y41C4A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41C4A.4c.1:c.117-2536T>C
Intron_number2/6
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw47552
MethodWGS_Hawaiian_Waterston