WormBase Tree Display for Variation: WBVar00180291
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| WBVar00180291 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00180291 | |||
| Other_name | haw47567 | ||||
| haw146336 | |||||
| cewivar00198517 | |||||
| Y41C4A.4f.1:c.*196A>T | |||||
| Y41C4A.4a.1:c.*196A>T | |||||
| Y41C4A.4g.1:c.*196A>T | |||||
| Y41C4A.4e.1:c.*196A>T | |||||
| HGVSg | CHROMOSOME_III:g.11693750A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y41C4A | |
| Flanking_sequences | aatgttcccatgtaattttttttgg | aaaaaaataatttttttccatctcc | |||
| Mapping_target | Y41C4A | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00566201 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00000793 | |||
| Transcript | Y41C4A.4e.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41C4A.4e.1:c.*196A>T | ||||
| cDNA_position | 1177 | ||||
| Exon_number | 9/9 | ||||
| Y41C4A.4g.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41C4A.4g.1:c.*196A>T | ||||
| cDNA_position | 1483 | ||||
| Exon_number | 7/7 | ||||
| Y41C4A.4a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41C4A.4a.1:c.*196A>T | ||||
| cDNA_position | 1276 | ||||
| Exon_number | 9/9 | ||||
| Y41C4A.4f.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41C4A.4f.1:c.*196A>T | ||||
| cDNA_position | 1032 | ||||
| Exon_number | 6/6 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw47567 | ||||
| Method | WGS_Hawaiian_Waterston |
