WormBase Tree Display for Variation: WBVar00182319
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| WBVar00182319 | Name | Public_name | WBVar00182319 | ||
|---|---|---|---|---|---|
| Other_name | snp_Y37D8A[6] | ||||
| haw49595 | |||||
| haw147826 | |||||
| cewivar00199603 | |||||
| CE32012:p.Leu164= | |||||
| CE20226:p.Leu239= | |||||
| Y37D8A.23b.1:c.715C>T | |||||
| Y37D8A.23c.1:c.490C>T | |||||
| Y37D8A.23a.1:c.715C>T | |||||
| CE31832:p.Leu239= | |||||
| HGVSg | CHROMOSOME_III:g.12947962C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y37D8A | |
| Flanking_sequences | aaatggaaaaatgattccagaagct | tagaagctaagattatcgaatgtaa | |||
| Mapping_target | Y37D8A | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00246939 | |||
| WBVar00567691 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006762 | |||
| Transcript | Y37D8A.23c.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y37D8A.23c.1:c.490C>T | ||||
| HGVSp | CE32012:p.Leu164= | ||||
| cDNA_position | 490 | ||||
| CDS_position | 490 | ||||
| Protein_position | 164 | ||||
| Exon_number | 4/6 | ||||
| Codon_change | Cta/Tta | ||||
| Amino_acid_change | L | ||||
| Y37D8A.23b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y37D8A.23b.1:c.715C>T | ||||
| HGVSp | CE31832:p.Leu239= | ||||
| cDNA_position | 715 | ||||
| CDS_position | 715 | ||||
| Protein_position | 239 | ||||
| Exon_number | 6/9 | ||||
| Codon_change | Cta/Tta | ||||
| Amino_acid_change | L | ||||
| Y37D8A.23a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y37D8A.23a.1:c.715C>T | ||||
| HGVSp | CE20226:p.Leu239= | ||||
| cDNA_position | 725 | ||||
| CDS_position | 715 | ||||
| Protein_position | 239 | ||||
| Exon_number | 7/10 | ||||
| Codon_change | Cta/Tta | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| Remark | [20081124 db] this Variation was previously named hw49595 | ||||
| Method | WGS_Hawaiian_Waterston |
