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WormBase Tree Display for Variation: WBVar00186418

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Name Class

WBVar00186418NamePublic_nameWBVar00186418
Other_namehaw53694
cewivar00035858
Y54G2A.2b.1:c.1311+190T>C
Y54G2A.2c.1:c.474+190T>C
Y54G2A.2a.1:c.1311+190T>C
HGVSgCHROMOSOME_IV:g.2794933T>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesttgaaaagcctatcaaaccgtaaattacatagaactccccgtaaatccac
Mapping_targetY54G2A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (26)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021868
TranscriptY54G2A.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.2c.1:c.474+190T>C
Intron_number3/4
Y54G2A.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.2a.1:c.1311+190T>C
Intron_number9/11
Y54G2A.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.2b.1:c.1311+190T>C
Intron_number9/11
Remark[20081124 db] this Variation was previously named hw53694
MethodWGS_Hawaiian_Waterston