WormBase Tree Display for Variation: WBVar00216479
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| WBVar00216479 | Name | Public_name | WBVar00216479 | ||
|---|---|---|---|---|---|
| Other_name | pas28255 | ||||
| cewivar00110057 | |||||
| D2045.1a.1:c.976+39A>G | |||||
| D2045.1d.1:c.1300+39A>G | |||||
| D2045.1c.1:c.976+39A>G | |||||
| HGVSg | CHROMOSOME_III:g.10463271A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | D2045 | |
| Flanking_sequences | ttaatttaaaaatttatttgtttcagcaataataacagcttcaaccagcaacaacaacagcgccgcaatccgaatattgcaccaaacgggcagccagtgaatcgacgtgccgagggtcttcgcggagatcgtcgtaatagtggaagctcttcagcgaacaatagtcgctacggtgctccagcagcggctcagcagaactattcacagaatcagcagcagcagcaaggtcaaaaaggttatcgccgccagaacgaggaaaatggttcgtgtacattcccgagagtacagtgtgtctctttg | tcattatctctctctcgttctctttctccgcgtccaacagttcttttttcggtgtattccgttttcttgacccatttcgcatgacataatttcgctagcggctgcagcggttgtcttcagctgattaattggagtgtttttcctcgtgggatgcggaaaaaagcgattttttttttgcaaattttcagcaaaaaaatcagatttttcccatcagaaaaccaatttttcattctttcctcacattttgatcacagaaatacgaaataattctgcaatagtgttattttcagtggaaaaatc | |||
| Mapping_target | D2045 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000231 | |||
| Transcript | D2045.1d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | D2045.1d.1:c.1300+39A>G | ||||
| Intron_number | 5/11 | ||||
| D2045.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | D2045.1a.1:c.976+39A>G | ||||
| Intron_number | 6/13 | ||||
| D2045.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | D2045.1c.1:c.976+39A>G | ||||
| Intron_number | 5/12 | ||||
| Method | WGS_Pasadena_Quinlan |
