WormBase Tree Display for Variation: WBVar00217505
expand all nodes | collapse all nodes | view schema
WBVar00217505 | Name | Public_name | WBVar00217505 | ||
---|---|---|---|---|---|
Other_name | pas29281 | ||||
cewivar00025918 | |||||
Y41C4A.4c.1:c.116+3104G>A | |||||
Y41C4A.4d.1:c.167+3104G>A | |||||
Y41C4A.4e.1:c.92+3104G>A | |||||
Y41C4A.4b.1:c.149+3104G>A | |||||
Y41C4A.4a.1:c.149+3104G>A | |||||
HGVSg | CHROMOSOME_III:g.11679601G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y41C4A | |
Flanking_sequences | aagactgagccggaatgcaacttttttccaaaagccatagctgaaaaagagcctgaaaagttgattttaatctggatttattcggataatgatcattcaagaagtctgttgaattctatgattctttatcataattcgatgctaaaacttctacaaaaaaattttccgctccgaagtcatctaggttcgattgcacttttttcaaagttttaatccgccaacgctcatttttcgataatttggctaatcgactgcttcacccaaaaggtcgaaggtttgtttcttgttgcaaaaacattt | ctcgcttctccttttccatctctatgtttttctgcacctctctcgggctgcggcggtgacggaaaaccgcaaattattcatctgcagcaacgtcttcacggaaatgaatggagcacgccgccgctgacgaattttttttgtgtgctccatttctagggcccccgttcctcgacaacttgtagatcattttttattacccgtgagacgtcactttttcatggtggccgagttttctaaatctcggccggtagcccatgaaacttgcctgctacaaattggtgaagccgatttttcgagaaa | |||
Mapping_target | Y41C4A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (23) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000793 | |||
Transcript | Y41C4A.4e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4e.1:c.92+3104G>A | ||||
Intron_number | 3/8 | ||||
Y41C4A.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4b.1:c.149+3104G>A | ||||
Intron_number | 2/6 | ||||
Y41C4A.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4a.1:c.149+3104G>A | ||||
Intron_number | 3/8 | ||||
Y41C4A.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4d.1:c.167+3104G>A | ||||
Intron_number | 3/8 | ||||
Y41C4A.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41C4A.4c.1:c.116+3104G>A | ||||
Intron_number | 2/6 | ||||
Method | WGS_Pasadena_Quinlan |