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WormBase Tree Display for Variation: WBVar00229364

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Name Class

WBVar00229364NamePublic_nameWBVar00229364
Other_namepas41140
cewivar00115241
Y44A6E.1b.1:c.193+343C>A
Y44A6E.1a.1:c.193+343C>A
HGVSgCHROMOSOME_V:g.20916099C>A
Sequence_detailsSMapS_parentSequenceF25C8
Flanking_sequencescttttcgatagacctaagtattttttgaaatgttgcaactttcaacaccctctggaagcgagaagaaatgatttcggaaaacaaatgtattcttcccttttctcctaaccaaaaacgtgacctaaagaacaagaatccacatggagcgtccacactaatttgaatttggggtgctgttacgtagtcaatgatcatttcattttggtggggtctcattttaaacattttacctaaattgaccaacgactgctggagagggttgatcaaaacatataatgggaaatatcatatttggagaaaaacaacaagactaatcatgcagattcggttgattctagaaatctaggtgcgcagttaaaggtggagtaccgaaatctgggaaaattttttaaatgattttaaatttgcccctgaaatcgaaaaactgcgtgcaaaaaataaaaaaaaaatttccctgattttaagcttgaaatcgcgaattttatttactttcccattacttttttttcaaatgcgcgcccaaataaattctccatggagcgcgtagggggagtgaaaataggtagagaaaattaaatgaagcagacgcgctccaggggg
Mapping_targetF25C8
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (22)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012857
TranscriptY44A6E.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY44A6E.1a.1:c.193+343C>A
Intron_number3/10
Y44A6E.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY44A6E.1b.1:c.193+343C>A
Intron_number3/10
MethodWGS_Pasadena_Quinlan