WormBase Tree Display for Variation: WBVar00229364
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WBVar00229364 | Name | Public_name | WBVar00229364 | ||
---|---|---|---|---|---|
Other_name | pas41140 | ||||
cewivar00115241 | |||||
Y44A6E.1b.1:c.193+343C>A | |||||
Y44A6E.1a.1:c.193+343C>A | |||||
HGVSg | CHROMOSOME_V:g.20916099C>A | ||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | |
Flanking_sequences | cttttcgatagacctaagtattttttgaaatgttgcaactttcaacaccctctggaagcgagaagaaatgatttcggaaaacaaatgtattcttcccttttctcctaaccaaaaacgtgacctaaagaacaagaatccacatggagcgtccacactaatttgaatttggggtgctgttacgtagtcaatgatcatttcattttggtggggtctcattttaaacattttacctaaattgaccaacgactgctggagagggttgatcaaaacatataatgggaaatatcatatttggagaaa | aacaacaagactaatcatgcagattcggttgattctagaaatctaggtgcgcagttaaaggtggagtaccgaaatctgggaaaattttttaaatgattttaaatttgcccctgaaatcgaaaaactgcgtgcaaaaaataaaaaaaaaatttccctgattttaagcttgaaatcgcgaattttatttactttcccattacttttttttcaaatgcgcgcccaaataaattctccatggagcgcgtagggggagtgaaaataggtagagaaaattaaatgaagcagacgcgctccaggggg | |||
Mapping_target | F25C8 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012857 | |||
Transcript | Y44A6E.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y44A6E.1a.1:c.193+343C>A | ||||
Intron_number | 3/10 | ||||
Y44A6E.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y44A6E.1b.1:c.193+343C>A | ||||
Intron_number | 3/10 | ||||
Method | WGS_Pasadena_Quinlan |