WormBase Tree Display for Variation: WBVar00249170
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| WBVar00249170 | Evidence | Paper_evidence | WBPaper00031197 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | t1626 | |||||
| Other_name | CE43543:p.Gln192Ter | ||||||
| C44B9.5.1:c.574C>T | |||||||
| HGVSg | CHROMOSOME_III:g.10898236C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | C44B9 | |||
| Flanking_sequences | aaaccatcgaaaaagcacaatgagcaacat | aaaagaagcctgagcaactcgatttcacac | |||||
| Mapping_target | C44B9 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00031197 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00007765 | ||||||
| WBStrain00007807 | |||||||
| Laboratory | GE | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00008082 | |||||
| Transcript | C44B9.5.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C44B9.5.1:c.574C>T | ||||||
| HGVSp | CE43543:p.Gln192Ter | ||||||
| cDNA_position | 639 | ||||||
| CDS_position | 574 | ||||||
| Protein_position | 192 | ||||||
| Exon_number | 4/9 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000503399 | ||||||
| Genetics | Interpolated_map_position | III | 5.5655 | ||||
| Description | Phenotype | WBPhenotype:0000000 | Paper_evidence | WBPaper00042018 | |||
| Curator_confirmed | WBPerson8161 | ||||||
| WBPhenotype:0000688 | Paper_evidence | WBPaper00031197 | |||||
| Curator_confirmed | WBPerson1819 | ||||||
| WBPhenotype:0000776 | Paper_evidence | WBPaper00042018 | |||||
| Curator_confirmed | WBPerson8161 | ||||||
| WBPhenotype:0001921 | Paper_evidence | WBPaper00031197 | |||||
| Curator_confirmed | WBPerson1819 | ||||||
| Reference | WBPaper00042018 | ||||||
| WBPaper00031197 | |||||||
| Method | Substitution_allele |
