WormBase Tree Display for Variation: WBVar00250243

WBVar00250243 Name: Public_name: tm1235
    Other_name: T01C1.2.1:c.524+6_820-65del
    HGVSg: CHROMOSOME_X:g.10720408_10720948del
  Sequence_details: SMap: S_parent: Sequence: T01C1
    Flanking_sequences: tttcacagagaatgtttcaaactctgacaa ctagccttcttgttccaagttttccttgtc
    Mapping_target: T01C1
    Source_location: 7 CHROMOSOME_X 10720407 10720949 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1235_external
      tm1235_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1235
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00011315
    Transcript: T01C1.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T01C1.2.1:c.524+6_820-65del
        Intron_number: 6-7/10
        Exon_number: 7/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
    Mapping_data: In_multi_point: 5513
  Description: Phenotype: WBPhenotype:0001785 Paper_evidence: WBPaper00046360
        Curator_confirmed: WBPerson3142
    Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
      WBPhenotype:0000643 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Comment from Dr. J. Kaplan to the National Bioresource Project of Japan: wt locomotion Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
      WBPhenotype:0000680 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Comment from Dr. J. Kaplan to the National Bioresource Project of Japan: wt aldicarb sensitivity. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
        Affected_by: Molecule: WBMol:00003650 Person_evidence: WBPerson7743
              Curator_confirmed: WBPerson48
  Reference: WBPaper00046360
  Remark: 9261/9262-9802/9803 (541 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele