WormBase Tree Display for Variation: WBVar00250836

WBVar00250836 Name: Public_name: tm1873
    HGVSg: CHROMOSOME_III:g.7380540_7381709del
  Sequence_details: SMap: S_parent: Sequence: T20B12
    Flanking_sequences: atgtcacgtcgtagattcccattgctagat cgattttccgagcgaaactaattacgaaaa
    Mapping_target: T20B12
    Source_location: 7 CHROMOSOME_III 7380539 7381710 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1873_external
      tm1873_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1873
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001974
    Transcript: T20B12.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-888
        CDS_position: ?-887
        Protein_position: ?-296
        Intron_number: 2-3/5
        Exon_number: 1-4/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
    Mapping_data: In_multi_point: 5263
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
  Remark: 15542/15543-16712/16713 (1170 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele