WormBase Tree Display for Variation: WBVar00250994

WBVar00250994 Name: Public_name: tm2048
    Other_name: T27D1.3.2:c.-16-264_320+82delinsTTTTC
    HGVSg: CHROMOSOME_III:g.3685038_3686072delinsGAAAA
  Sequence_details: SMap: S_parent: Sequence: T27D1
    Flanking_sequences: atgttactcacttgacaaataaaaaaaagt ttgaaaattggccctttagagcttcgttac
    Mapping_target: T27D1
    Source_location: 7 CHROMOSOME_III 3685037 3686073 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: GAAAA
      Deletion
    PCR_product: tm2048_external
      tm2048_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2048
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00012084
    Transcript: T27D1.3.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T27D1.3.2:c.-16-264_320+82delinsTTTTC
        Intron_number: 1-4/9
        Exon_number: 2-4/10
      T27D1.3.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/8
        Exon_number: 1-3/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment from Dr. P. Bazzicalupo to the National Bioresource Project of Japan: normal fertility. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Reference: WBPaper00066032
  Remark: 8126/8127-GAAAA-9161/9162 (1035 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele