WormBase Tree Display for Variation: WBVar00269789

WBVar00269789 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00269789
    Other_name: uCE3-952
      F47D12.1c.1:c.906-129del
      F47D12.1b.1:c.906-129del
      F47D12.1a.1:c.906-129del
      F47D12.1e.1:c.66-129del
    HGVSg: CHROMOSOME_III:g.6318012del
  Sequence_details: SMap: S_parent: Sequence: F47D12
    Flanking_sequences: AAAGTGATTAAAAAATTACAAAAAAAACAGTGTAGAGTTTTCAATGTAAAGTTTCAAGAACAATCTCAGAATACTTTTGATGACTTCAGATAAACTTTTT GTTTAAAGCCATTTTCCAAATTAAAAAAAAATCTCACGAAAACAGTTGAATTGAACGCTTAAGCGACAAGTTTTATCAAAACTGTAATAGACCAAAAGCT
    Mapping_target: F47D12
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00001518
    Transcript: F47D12.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F47D12.1b.1:c.906-129del
        Intron_number: 7/12
      F47D12.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F47D12.1e.1:c.66-129del
        Intron_number: 2/7
      F47D12.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F47D12.1a.1:c.906-129del
        Intron_number: 7/13
      F47D12.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F47D12.1c.1:c.906-129del
        Intron_number: 7/12
  Reference: WBPaper00005369
  Method: SNP_Swan