WormBase Tree Display for Variation: WBVar00275220
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WBVar00275220 | Name | Public_name | x26 | ||||||
---|---|---|---|---|---|---|---|---|---|
Other_name | CE30706:p.Cys151Tyr | ||||||||
Y110A7A.3.1:c.452G>A | |||||||||
HGVSg | CHROMOSOME_I:g.5146075G>A | ||||||||
Sequence_details | SMap | S_parent | Sequence | Y110A7A | |||||
Flanking_sequences | aaaacttcctaaatttatatttcagcatgt | ccaaatcgacgttgaattctttccatttga | |||||||
Mapping_target | Y110A7A | ||||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00024530 | ||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00040925 | ||||||||
Laboratory | ZZ | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00006797 | |||||||
Transcript | Y110A7A.3.1 (12) | ||||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00024530 | |||||
Genetics | Interpolated_map_position | I | -0.351746 | ||||||
Description | Phenotype | WBPhenotype:0000421 | Paper_evidence | WBPaper00000484 | |||||
Person_evidence | WBPerson261 | ||||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPerson712 | |||||||||
Remark | Partial resistance at 16C. Complete resistance at 25C. | Paper_evidence | WBPaper00000484 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
slight levamisole resistance | Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Affected_by | Molecule | WBMol:00004019 | Paper_evidence | WBPaper00000484 | |||||
Person_evidence | WBPerson261 | ||||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPerson712 | |||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00000484 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Treatment | 1mM levamisole | Paper_evidence | WBPaper00000484 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Temperature | 16C, 25C | Paper_evidence | WBPaper00000484 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0000554 | Paper_evidence | WBPaper00000484 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Mutants succumb to osmotic shock. | Paper_evidence | WBPaper00000484 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Penetrance | Incomplete | Paper_evidence | WBPaper00000484 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Range | 30 | 30 | Paper_evidence | WBPaper00000484 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Treatment | 10mM HEPES (pH 7.0), 0.25 per cent TWEEN 20. | Paper_evidence | WBPaper00000484 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0000643 | Paper_evidence | WBPaper00000484 | |||||||
Person_evidence | WBPerson261 | ||||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPerson712 | |||||||||
Remark | Conditional Unc at 25C | Paper_evidence | WBPaper00000484 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
almost normal movement | Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00000484 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Temperature | 16C, 25C | Paper_evidence | WBPaper00000484 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0001700 | Paper_evidence | WBPaper00034750 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Mutants show defects in swimming | Paper_evidence | WBPaper00034750 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_not_observed | WBPhenotype:0001578 | Paper_evidence | WBPaper00000484 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Animals are not resistant to the cholinergic agonist carbachol. | Paper_evidence | WBPaper00000484 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Treatment | 1mM carbachol | Paper_evidence | WBPaper00000484 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Disease_info | Models_disease | DOID:3635 | |||||||
Models_disease_in_annotation | WBDOannot00000869 | ||||||||
WBDOannot00000870 | |||||||||
WBDOannot00000873 | |||||||||
WBDOannot00000874 | |||||||||
WBDOannot00000875 | |||||||||
Reference | WBPaper00000484 | ||||||||
WBPaper00018321 | |||||||||
WBPaper00023610 | |||||||||
WBPaper00034750 | |||||||||
Method | Substitution_allele |