WormBase Tree Display for Variation: WBVar00276169

WBVar00276169 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5636
    Other_name: C56G2.1c.1:c.531-13C>T
      C56G2.1a.1:c.531-13C>T
      C56G2.1d.1:c.531-13C>T
      C56G2.1e.1:c.231-13C>T
    HGVSg: CHROMOSOME_III:g.6355043C>T
  Sequence_details: SMap: S_parent: Sequence: C56G2
    Flanking_sequences: TCTCTTTAGGTTCACATGATGTCAATTATT TAATGTTTTCAGCTCGATTGGCGTCTCACA
    Mapping_target: C56G2
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00016977
    Transcript: C56G2.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C56G2.1d.1:c.531-13C>T
        Intron_number: 3/14
      C56G2.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C56G2.1c.1:c.531-13C>T
        Intron_number: 3/13
      C56G2.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C56G2.1a.1:c.531-13C>T
        Intron_number: 4/16
      C56G2.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C56G2.1e.1:c.231-13C>T
        Intron_number: 2/14
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele