WormBase Tree Display for Variation: WBVar00276899

WBVar00276899 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5523
    Other_name: K06A5.8b.2:c.1687-96T>G
      K06A5.8d.1:c.889-96T>G
      K06A5.8b.1:c.1687-96T>G
      K06A5.8d.2:c.889-96T>G
      K06A5.8a.1:c.1687-96T>G
    HGVSg: CHROMOSOME_I:g.6479242A>C
  Sequence_details: SMap: S_parent: Sequence: K06A5
    Flanking_sequences: TTCTTATTTTGAAATCTGAGACTACATACA TTAGAATTTGTCCTTGCAAGGTTTGAGAAA
    Mapping_target: K06A5
    Type_of_mutation: Substitution: A C
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019434
    Transcript: K06A5.8d.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A5.8d.2:c.889-96T>G
        Intron_number: 11/20
      K06A5.8d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A5.8d.1:c.889-96T>G
        Intron_number: 11/19
      K06A5.8b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A5.8b.2:c.1687-96T>G
        Intron_number: 10/21
      K06A5.8b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A5.8b.1:c.1687-96T>G
        Intron_number: 11/21
      K06A5.8a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A5.8a.1:c.1687-96T>G
        Intron_number: 11/21
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele