WormBase Tree Display for Variation: WBVar00277442
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WBVar00277442 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2747 | |||
Other_name | W05F2.5:n.530A>T | ||||
HGVSg | CHROMOSOME_I:g.3373150A>T | ||||
Sequence_details | SMap | S_parent | Sequence | W05F2 | |
Flanking_sequences | ACATTTTGACACTTGCGTGAGCTTTGAGCA | CGATCTGGATCAATCGATGGTGAAGATTTT | |||
Mapping_target | W05F2 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00005866 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00021037 | |||
Pseudogene | W05F2.5 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W05F2.5:n.530A>T | ||||
cDNA_position | 530 | ||||
Exon_number | 3/4 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |