WormBase Tree Display for Variation: WBVar00548570
expand all nodes | collapse all nodes | view schema
| WBVar00548570 | Name | Public_name | WBVar00548570 | ||
|---|---|---|---|---|---|
| Other_name | haw128705 | ||||
| cewivar00010282 | |||||
| Y49F6B.10.1:c.1035A>T | |||||
| CE25334:p.Gly345= | |||||
| HGVSg | CHROMOSOME_II:g.3500228T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y49F6B | |
| Flanking_sequences | CCTCCATCCTTGGCGCAATACTTTGGACAAATTCCCCGTTCTCCAGCTCT | CCGGCTTTTCCATCGTGTCCTGGAACTCCAGGAACTCCATCTTCTCCATT | |||
| Mapping_target | Y49F6B | ||||
| Type_of_mutation | Substitution | t | a | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (31) | |||||
| Laboratory | AX | ||||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01236768 | |||
| WBVar01367980 | |||||
| WBVar01302945 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000647 | |||
| Transcript | Y49F6B.10.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y49F6B.10.1:c.1035A>T | ||||
| HGVSp | CE25334:p.Gly345= | ||||
| cDNA_position | 1161 | ||||
| CDS_position | 1035 | ||||
| Protein_position | 345 | ||||
| Exon_number | 4/5 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Yanai |
