WormBase Tree Display for Variation: WBVar00587055

WBVar00587055 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00587055
    Other_name: haw167190
      cewivar00235681
      T19F4.1b.1:c.1200-139G>A
      T19F4.1c.1:c.*1-139G>A
      T19F4.1a.1:c.*1-139G>A
    HGVSg: CHROMOSOME_V:g.6873332G>A
  Sequence_details: SMap: S_parent: Sequence: T19F4
    Flanking_sequences: CAAAGCTGTAAGCTGATCTTTTCATTCTATTTCTCTCCCGAAACTCATGG AACCTTTTTTTTTTGAAATGTGATGTTACTGTATAAAATATGAGTGACGT
    Mapping_target: T19F4
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Yanai
    Person: WBPerson4037
    Analysis: WGS_Yanai
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00020586
    Transcript: T19F4.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T19F4.1b.1:c.1200-139G>A
        Intron_number: 9/10
      T19F4.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T19F4.1a.1:c.*1-139G>A
        Intron_number: 10/10
      T19F4.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T19F4.1c.1:c.*1-139G>A
        Intron_number: 8/8
  Reference: WBPaper00038208
  Method: WGS_Yanai