WormBase Tree Display for Variation: WBVar00597558

WBVar00597558 Name: Public_name: tm5270
    Other_name: C30B5.9.1:c.16-2_202+19del
    HGVSg: CHROMOSOME_II:g.6219084_6219334del
  Sequence_details: SMap: S_parent: Sequence: C30B5
    Flanking_sequences: aataattaattttttgatattatttttggt acaaaaatataaattaacacttttctcaaa
    Mapping_target: C30B5
    Source_location: 7 CHROMOSOME_II 6219083 6219335 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5270_external
      tm5270_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5270
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00194710
    Transcript: C30B5.9.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C30B5.9.1:c.16-2_202+19del
        Intron_number: 2-4/7
        Exon_number: 3-4/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 27819/27820-28070/28071 (251 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele