WormBase Tree Display for Variation: WBVar00600981

WBVar00600981 Name: Public_name: tm5617
    Other_name: F10B5.9.1:c.294+9_485delinsAT
    HGVSg: CHROMOSOME_II:g.8157721_8157947delinsAT
  Sequence_details: SMap: S_parent: Sequence: F10B5
    Flanking_sequences: tggatatcactatgcgagtttggtcagtat taaggcagcgaaaatcgaagctagaacagc
    Mapping_target: F10B5
    Source_location: 7 CHROMOSOME_II 8157720 8157948 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: AT
      Deletion
    PCR_product: tm5617_external
      tm5617_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5617
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00008643
    Transcript: F10B5.9.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F10B5.9.1:c.294+9_485delinsAT
        cDNA_position: ?-524
        CDS_position: ?-485
        Protein_position: ?-162
        Intron_number: 3/4
        Exon_number: 4/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 18597/18598-AT-18824/18825 (227 bp deletion + 2 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele