WormBase Tree Display for Variation: WBVar00601062
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| WBVar00601062 | Evidence | Paper_evidence | WBPaper00040337 | ||
|---|---|---|---|---|---|
| Name | Public_name | y418 | |||
| Other_name | T03F1.5.3:c.456+1_769delinsTTCTTCGCCTCCAA | ||||
| T03F1.5.2:c.456+1_769delinsTTCTTCGCCTCCAA | |||||
| T03F1.5.1:c.456+1_769delinsTTCTTCGCCTCCAA | |||||
| HGVSg | CHROMOSOME_I:g.3838584_3838975delinsTTGGAGGCGAAGAA | ||||
| Sequence_details | SMap | S_parent | Sequence | T03F1 | |
| Flanking_sequences | aagtcgactcgtctctggtcaatcttccag | tcgcctccaagaagatggtcaccattttct | |||
| Mapping_target | T03F1 | ||||
| Type_of_mutation | Insertion | TTCTTCGCCTCCAA | |||
| Deletion | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Laboratory | TY | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00020187 | |||
| Transcript | T03F1.5.3 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | T03F1.5.3:c.456+1_769delinsTTCTTCGCCTCCAA | ||||
| cDNA_position | ?-786 | ||||
| CDS_position | ?-769 | ||||
| Protein_position | ?-257 | ||||
| Intron_number | 2/4 | ||||
| Exon_number | 3/5 | ||||
| T03F1.5.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T03F1.5.2:c.456+1_769delinsTTCTTCGCCTCCAA | ||||
| cDNA_position | ?-830 | ||||
| CDS_position | ?-769 | ||||
| Protein_position | ?-257 | ||||
| Intron_number | 3/5 | ||||
| Exon_number | 4/6 | ||||
| T03F1.5.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T03F1.5.1:c.456+1_769delinsTTCTTCGCCTCCAA | ||||
| cDNA_position | ?-855 | ||||
| CDS_position | ?-769 | ||||
| Protein_position | ?-257 | ||||
| Intron_number | 3/5 | ||||
| Exon_number | 4/6 | ||||
| Interactor | WBInteraction000501187 | ||||
| WBInteraction000501188 | |||||
| Genetics | Interpolated_map_position | I | -1.99974 | ||
| Description | Phenotype_not_observed | WBPhenotype:0000688 | Paper_evidence | WBPaper00040337 | |
| Curator_confirmed | WBPerson712 | ||||
| Reference | WBPaper00040337 | ||||
| Method | Deletion_and_insertion_allele |
