WormBase Tree Display for Variation: WBVar01402347
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WBVar01402347 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01402347 | ||||
Other_name | Y54G2A.35a.1:c.347+8del | |||||
Y54G2A.35b.1:c.347+8del | ||||||
HGVSg | CHROMOSOME_IV:g.2961083del | |||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||
Flanking_sequences | CTGTCCGTCAGCCAATCAAATACCCAATCATCTCCTCCACCAAGTATGTT | CCCCCCCCCCCCCCCCTCAACAATAATTCTCCAATTCCAAATTGCTCAGA | ||||
Mapping_target | Y54G2A | |||||
Type_of_mutation | Deletion | c | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00026322 | From_analysis | WGS_De_Bono | |||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
DB_info | Database | dbSNP_ss | ss | 539136926 | ||
Status | Live | |||||
Affects | Gene | WBGene00021897 | ||||
Transcript | Y54G2A.35b.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y54G2A.35b.1:c.347+8del | |||||
Intron_number | 3/6 | |||||
Y54G2A.35a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y54G2A.35a.1:c.347+8del | |||||
Intron_number | 2/6 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |