WormBase Tree Display for Variation: WBVar01457098
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WBVar01457098 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01457098 | ||||
Other_name | cewivar00360163 | |||||
CE20432:p.Val56= | ||||||
ZK550.6.1:c.168A>G | ||||||
HGVSg | CHROMOSOME_IV:g.17262116T>C | |||||
Sequence_details | SMap | S_parent | Sequence | F26D10 | ||
Flanking_sequences | TTTCATGACGGTCATGTTTTCTGGAGCTTT | ACTTTTTTCTCGCAAATGTCCTGAAAATAC | ||||
Mapping_target | F26D10 | |||||
Type_of_mutation | Substitution | t | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (29) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193342755 | ||
dbSNP_ss | ss | 295518674 | ||||
Status | Live | |||||
Affects | Gene | WBGene00014000 | ||||
Transcript | ZK550.6.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | ZK550.6.1:c.168A>G | |||||
HGVSp | CE20432:p.Val56= | |||||
cDNA_position | 177 | |||||
CDS_position | 168 | |||||
Protein_position | 56 | |||||
Exon_number | 3/7 | |||||
Codon_change | gtA/gtG | |||||
Amino_acid_change | V | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |