WormBase Tree Display for Variation: WBVar01474360

WBVar01474360 Name: Public_name: tm6354
    HGVSg: CHROMOSOME_I:g.10789129_10789795del
  Sequence_details: SMap: S_parent: Sequence: F55A3
    Flanking_sequences: tcgtgactttaacacaatttctaactttca acaaccgcatcatggacagctgcaagagct
    Mapping_target: F55A3
    Source_location: 7 CHROMOSOME_I 10789128 10789796 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6354_external
      tm6354_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6354
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00018849
    Transcript: F55A3.3.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-568
        CDS_position: ?-561
        Protein_position: ?-187
        Intron_number: 2-3/7
        Exon_number: 1-4/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 14414/14415-15081/15082 (667 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele