WormBase Tree Display for Variation: WBVar01513989
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WBVar01513989 | Name | Public_name | WBVar01513989 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00036225 | |||||||
Y54G2A.17a.1:c.-39+3372G>A | ||||||||
Y54G2A.5b.1:c.-24C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2887028C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | TTTGAGATTTTCAAAAAAAACTCGTCATTT | ATATTTGTTGTAAGCTATAGGAAATGCAGA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2887026 | 2887026 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021871 | ||||||
WBGene00021882 | ||||||||
Transcript | Y54G2A.5b.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.5b.1:c.-24C>T | |||||||
cDNA_position | 74 | |||||||
Exon_number | 1/6 | |||||||
Y54G2A.17a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.-39+3372G>A | |||||||
Intron_number | 1/8 | |||||||
Method | WGS_Flibotte |