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WormBase Tree Display for Variation: WBVar01513989

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Name Class

WBVar01513989NamePublic_nameWBVar01513989
Other_namecewivar00036225
Y54G2A.17a.1:c.-39+3372G>A
Y54G2A.5b.1:c.-24C>T
HGVSgCHROMOSOME_IV:g.2887028C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTTGAGATTTTCAAAAAAAACTCGTCATTTATATTTGTTGTAAGCTATAGGAAATGCAGA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28870262887026From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.5b.1:c.-24C>T
cDNA_position74
Exon_number1/6
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+3372G>A
Intron_number1/8
MethodWGS_Flibotte