WormBase Tree Display for Gene: WBGene00021871
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| WBGene00021871 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | dml-1 | Person_evidence | WBPerson600 | |||||
| Sequence_name | Y54G2A.5 | ||||||||
| Molecular_name | Y54G2A.5a | ||||||||
| Y54G2A.5a.1 | |||||||||
| CE48099 | |||||||||
| Y54G2A.5b | |||||||||
| CE33889 | |||||||||
| Y54G2A.5c | |||||||||
| CE48813 | |||||||||
| Y54G2A.5b.1 | |||||||||
| Y54G2A.5c.1 | |||||||||
| Other_name | CELE_Y54G2A.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dml-1 | ||||||||
| DB_info | Database | AceView | gene | 4D655C | |||||
| 4D655 | |||||||||
| WormQTL | gene | WBGene00021871 | |||||||
| WormFlux | gene | WBGene00021871 | |||||||
| NDB | locus_tag | CELE_Y54G2A.5 | |||||||
| NCBI | gene | 177071 | |||||||
| RefSeq | protein | NM_001307325.3 | |||||||
| NM_001028334.8 | |||||||||
| NM_001028335.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF352921 | |||||||
| TrEMBL | UniProtAcc | Q8WTL0 | |||||||
| H2L0Q9 | |||||||||
| U4PDW4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8WTL0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Jun 2009 11:58:08 | WBPerson9133 | Name_change | CGC_name | dml-1 | ||||
| 3 | 21 Dec 2012 17:26:33 | WBPerson615 | Event | Split_into | WBGene00235102 | ||||
| Split_into | WBGene00235102 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dml | ||||||||
| Allele (67) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (13) | |||||||||
| Paralog | WBGene00010779 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in muscle cell based on microarray studies. Is affected by several genes including daf-2; eat-2; and sek-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.5a | |||||||
| Y54G2A.5b | |||||||||
| Y54G2A.5c | |||||||||
| Corresponding_CDS_history | Y54G2A.5a:wp236 | ||||||||
| Corresponding_transcript | Y54G2A.5a.1 | ||||||||
| Y54G2A.5b.1 | |||||||||
| Y54G2A.5c.1 | |||||||||
| Associated_feature | WBsf659820 | ||||||||
| WBsf660007 | |||||||||
| WBsf660008 | |||||||||
| WBsf981701 | |||||||||
| WBsf995803 | |||||||||
| WBsf995804 | |||||||||
| WBsf1016972 | |||||||||
| WBsf228066 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000667 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057470 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014015 | ||||||||
| Expr1039605 | |||||||||
| Expr1160913 | |||||||||
| Expr2010961 | |||||||||
| Expr2029200 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (100) | |||||||||
| Map_info | Map | IV | Position | -6.72516 | Error | 0.000996 | |||
| Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
