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WormBase Tree Display for Variation: WBVar01513990

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Name Class

WBVar01513990NamePublic_nameWBVar01513990
Other_namecewivar00036227
Y54G2A.5a.1:c.28A>G
Y54G2A.5b.1:c.25-45A>G
Y54G2A.17a.1:c.-39+3057T>C
CE48099:p.Thr10Ala
HGVSgCHROMOSOME_IV:g.2887343A>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesAGAAAAAAAAATCTGCGGCTTTTGCAGGAACCCCCATCTCACGGCAAATTCTCAGAATAG
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28873412887341From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.5b.1:c.25-45A>G
Intron_number2/5
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+3057T>C
Intron_number1/8
Y54G2A.5a.1 (11)
MethodWGS_Flibotte