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WormBase Tree Display for Variation: WBVar01514000

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Name Class

WBVar01514000NamePublic_nameWBVar01514000
Other_namecewivar00036237
Y54G2A.5b.1:c.270+325A>C
Y54G2A.5a.1:c.318+325A>C
Y54G2A.5c.1:c.216+325A>C
Y54G2A.17a.1:c.-39+2442T>G
HGVSgCHROMOSOME_IV:g.2887958A>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesGATTTAATCGAATGGGTCTTGTCGCGATAAAACGTTATGGTAACACATTTTTGGTAGATT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28879562887956From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.5b.1:c.270+325A>C
Intron_number3/5
Y54G2A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.5c.1:c.216+325A>C
Intron_number1/2
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+2442T>G
Intron_number1/8
Y54G2A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.5a.1:c.318+325A>C
Intron_number3/5
MethodWGS_Flibotte