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WormBase Tree Display for Variation: WBVar01514002

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Name Class

WBVar01514002NamePublic_nameWBVar01514002
Other_namecewivar00036240
Y54G2A.5a.1:c.*161G>T
Y54G2A.17a.1:c.-39+1218C>A
HGVSgCHROMOSOME_IV:g.2889182G>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesAAGAATTTTTTTTGACTTGTTTTTTGGATTTAACACAAAAACTGCAATTTTTGTCGATTTTCTCACGAAA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28891802889180From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+1218C>A
Intron_number1/8
Y54G2A.5a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.5a.1:c.*161G>T
cDNA_position924
Exon_number6/6
MethodWGS_Flibotte