WormBase Tree Display for Variation: WBVar01640531
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WBVar01640531 | Name | Public_name | WBVar01640531 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00322609 | |||||||
Y39G10AR.3b.1:c.540+227C>T | ||||||||
Y39G10AR.3a.1:c.654+227C>T | ||||||||
HGVSg | CHROMOSOME_I:g.2360565C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y39G10AR | ||||
Flanking_sequences | GTGGCCGAGGAATTGAGAAAACTCGGTCAC | AGTTTTTTGCGTCCACCTGGAATATTTTGA | ||||||
Mapping_target | Y39G10AR | |||||||
Source_location | 225 | CHROMOSOME_I | 2360567 | 2360567 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021461 | ||||||
Transcript | Y39G10AR.3a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39G10AR.3a.1:c.654+227C>T | |||||||
Intron_number | 5/20 | |||||||
Y39G10AR.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39G10AR.3b.1:c.540+227C>T | |||||||
Intron_number | 4/18 | |||||||
Method | WGS_Flibotte |