WormBase Tree Display for Variation: WBVar01678826
expand all nodes | collapse all nodes | view schema
WBVar01678826 | Name | Public_name | WBVar01678826 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (11) | ||||||||
HGVSg | CHROMOSOME_V:g.20886164G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||||
Flanking_sequences | TGGTGATTTTCTACGCGCAAAAGCCAAGGC | ATATTAGCAGGACTAGAAAGAGTACAACCT | ||||||
Mapping_target | F25C8 | |||||||
Source_location | 225 | CHROMOSOME_V | 20886133 | 20886133 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin (5) | ||||||||
Affects | Gene | WBGene00006812 | ||||||
Transcript | F25C8.3d.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3d.1:c.2406G>A | |||||||
HGVSp | CE43592:p.Ala802= | |||||||
cDNA_position | 2406 | |||||||
CDS_position | 2406 | |||||||
Protein_position | 802 | |||||||
Exon_number | 11/37 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
F25C8.3b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3b.1:c.2406G>A | |||||||
HGVSp | CE47117:p.Ala802= | |||||||
cDNA_position | 2659 | |||||||
CDS_position | 2406 | |||||||
Protein_position | 802 | |||||||
Exon_number | 12/36 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
F25C8.3e.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3e.1:c.2406G>A | |||||||
HGVSp | CE47428:p.Ala802= | |||||||
cDNA_position | 2406 | |||||||
CDS_position | 2406 | |||||||
Protein_position | 802 | |||||||
Exon_number | 11/34 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
F25C8.3c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3c.1:c.2352G>A | |||||||
HGVSp | CE47217:p.Ala784= | |||||||
cDNA_position | 2352 | |||||||
CDS_position | 2352 | |||||||
Protein_position | 784 | |||||||
Exon_number | 11/35 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
F25C8.3a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3a.1:c.2406G>A | |||||||
HGVSp | CE41563:p.Ala802= | |||||||
cDNA_position | 2406 | |||||||
CDS_position | 2406 | |||||||
Protein_position | 802 | |||||||
Exon_number | 11/37 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |