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WormBase Tree Display for Variation: WBVar01678828

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Name Class

WBVar01678828NamePublic_nameWBVar01678828
Other_name (11)
HGVSgCHROMOSOME_V:g.20895442A>T
Sequence_detailsSMapS_parentSequenceF25C8
Flanking_sequencesAACTGACGAAGACCCACTAGATATCCTGGGTTGGTTCCTTATGAGAAACCATTGAAAGCT
Mapping_targetF25C8
Source_location225CHROMOSOME_V2089541120895411From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006637From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006812
TranscriptF25C8.3d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF25C8.3d.1:c.7374A>T
HGVSpCE43592:p.Gly2458=
cDNA_position7374
CDS_position7374
Protein_position2458
Exon_number30/37
Codon_changeggA/ggT
Amino_acid_changeG
F25C8.3b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF25C8.3b.1:c.7197A>T
HGVSpCE47117:p.Gly2399=
cDNA_position7450
CDS_position7197
Protein_position2399
Exon_number28/36
Codon_changeggA/ggT
Amino_acid_changeG
F25C8.3e.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF25C8.3e.1:c.7065A>T
HGVSpCE47428:p.Gly2355=
cDNA_position7065
CDS_position7065
Protein_position2355
Exon_number26/34
Codon_changeggA/ggT
Amino_acid_changeG
F25C8.3c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF25C8.3c.1:c.7170A>T
HGVSpCE47217:p.Gly2390=
cDNA_position7170
CDS_position7170
Protein_position2390
Exon_number28/35
Codon_changeggA/ggT
Amino_acid_changeG
F25C8.3a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF25C8.3a.1:c.7260A>T
HGVSpCE41563:p.Gly2420=
cDNA_position7260
CDS_position7260
Protein_position2420
Exon_number29/37
Codon_changeggA/ggT
Amino_acid_changeG
MethodWGS_Flibotte