WormBase Tree Display for Variation: WBVar01678828
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WBVar01678828 | Name | Public_name | WBVar01678828 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (11) | ||||||||
HGVSg | CHROMOSOME_V:g.20895442A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||||
Flanking_sequences | AACTGACGAAGACCCACTAGATATCCTGGG | TTGGTTCCTTATGAGAAACCATTGAAAGCT | ||||||
Mapping_target | F25C8 | |||||||
Source_location | 225 | CHROMOSOME_V | 20895411 | 20895411 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006812 | ||||||
Transcript | F25C8.3d.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3d.1:c.7374A>T | |||||||
HGVSp | CE43592:p.Gly2458= | |||||||
cDNA_position | 7374 | |||||||
CDS_position | 7374 | |||||||
Protein_position | 2458 | |||||||
Exon_number | 30/37 | |||||||
Codon_change | ggA/ggT | |||||||
Amino_acid_change | G | |||||||
F25C8.3b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3b.1:c.7197A>T | |||||||
HGVSp | CE47117:p.Gly2399= | |||||||
cDNA_position | 7450 | |||||||
CDS_position | 7197 | |||||||
Protein_position | 2399 | |||||||
Exon_number | 28/36 | |||||||
Codon_change | ggA/ggT | |||||||
Amino_acid_change | G | |||||||
F25C8.3e.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3e.1:c.7065A>T | |||||||
HGVSp | CE47428:p.Gly2355= | |||||||
cDNA_position | 7065 | |||||||
CDS_position | 7065 | |||||||
Protein_position | 2355 | |||||||
Exon_number | 26/34 | |||||||
Codon_change | ggA/ggT | |||||||
Amino_acid_change | G | |||||||
F25C8.3c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3c.1:c.7170A>T | |||||||
HGVSp | CE47217:p.Gly2390= | |||||||
cDNA_position | 7170 | |||||||
CDS_position | 7170 | |||||||
Protein_position | 2390 | |||||||
Exon_number | 28/35 | |||||||
Codon_change | ggA/ggT | |||||||
Amino_acid_change | G | |||||||
F25C8.3a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F25C8.3a.1:c.7260A>T | |||||||
HGVSp | CE41563:p.Gly2420= | |||||||
cDNA_position | 7260 | |||||||
CDS_position | 7260 | |||||||
Protein_position | 2420 | |||||||
Exon_number | 29/37 | |||||||
Codon_change | ggA/ggT | |||||||
Amino_acid_change | G | |||||||
Method | WGS_Flibotte |