WormBase Tree Display for Variation: WBVar01822419
expand all nodes | collapse all nodes | view schema
WBVar01822419 | Name | Public_name | WBVar01822419 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00534186 | |||||||
C15C7.1.1:c.330A>G | ||||||||
CE30865:p.Ser110= | ||||||||
HGVSg | CHROMOSOME_X:g.3165331A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | C15C7 | ||||
Flanking_sequences | CAGTCAATGCAAAATGATCATGGTGCTCTC | GCTCTCCTGTTTTTCCTCGTCTTTGTCCTT | ||||||
Mapping_target | C15C7 | |||||||
Source_location | 225 | CHROMOSOME_X | 3165321 | 3165321 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00015789 | ||||||
Transcript | C15C7.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C15C7.1.1:c.330A>G | |||||||
HGVSp | CE30865:p.Ser110= | |||||||
cDNA_position | 342 | |||||||
CDS_position | 330 | |||||||
Protein_position | 110 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | tcA/tcG | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |