WormBase Tree Display for Variation: WBVar01878005
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WBVar01878005 | Name | Public_name | WBVar01878005 | ||
---|---|---|---|---|---|
Other_name | cewivar00592446 | ||||
CE43592:p.Ala1476= | |||||
F25C8.3d.1:c.4428A>G | |||||
F25C8.3c.1:c.4324+141A>G | |||||
F25C8.3e.1:c.4246+141A>G | |||||
F25C8.3b.1:c.4378+141A>G | |||||
F25C8.3a.1:c.4378+141A>G | |||||
HGVSg | CHROMOSOME_V:g.20890554A>G | ||||
Sequence_details (6) | |||||
Variation_type | Natural_variant | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||
Laboratory | VC | ||||
Analysis | Million_mutation_project_reanalysis | ||||
Status | Live | ||||
Affects | Gene | WBGene00006812 | |||
Transcript | F25C8.3d.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F25C8.3d.1:c.4428A>G | ||||
HGVSp | CE43592:p.Ala1476= | ||||
cDNA_position | 4428 | ||||
CDS_position | 4428 | ||||
Protein_position | 1476 | ||||
Exon_number | 20/37 | ||||
Codon_change | gcA/gcG | ||||
Amino_acid_change | A | ||||
F25C8.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3b.1:c.4378+141A>G | ||||
Intron_number | 20/35 | ||||
F25C8.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3e.1:c.4246+141A>G | ||||
Intron_number | 18/33 | ||||
F25C8.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3c.1:c.4324+141A>G | ||||
Intron_number | 19/34 | ||||
F25C8.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3a.1:c.4378+141A>G | ||||
Intron_number | 19/36 | ||||
Method | WGS_Flibotte |