WormBase Tree Display for Variation: WBVar01890246
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WBVar01890246 | Name | Public_name | WBVar01890246 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00605330 | |||||||
CE17653:p.Val660= | ||||||||
F11A6.1a.2:c.1980C>T | ||||||||
F11A6.1a.1:c.1980C>T | ||||||||
HGVSg | CHROMOSOME_I:g.11680533C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F11A6 | ||||
Flanking_sequences | TGGAGGCCAACATGCTTCACCGTTAGCCGT | AGAAGTGTCCAGATGGAAGCCACGTCATCC | ||||||
Mapping_target | F11A6 | |||||||
Source_location | 225 | CHROMOSOME_I | 11680524 | 11680524 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002232 | ||||||
Transcript | F11A6.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F11A6.1a.1:c.1980C>T | |||||||
HGVSp | CE17653:p.Val660= | |||||||
cDNA_position | 2080 | |||||||
CDS_position | 1980 | |||||||
Protein_position | 660 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
F11A6.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F11A6.1a.2:c.1980C>T | |||||||
HGVSp | CE17653:p.Val660= | |||||||
cDNA_position | 2084 | |||||||
CDS_position | 1980 | |||||||
Protein_position | 660 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |