WormBase Tree Display for Variation: WBVar01914169
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WBVar01914169 | Name | Public_name | WBVar01914169 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00630315 | |||||||
F25C8.3b.1:c.9455A>T | ||||||||
CE41563:p.Asn3173Ile | ||||||||
F25C8.3a.1:c.9518A>T | ||||||||
CE43592:p.Asn3211Ile | ||||||||
CE47217:p.Asn3143Ile | ||||||||
F25C8.3e.1:c.9323A>T | ||||||||
CE47117:p.Asn3152Ile | ||||||||
CE47428:p.Asn3108Ile | ||||||||
F25C8.3c.1:c.9428A>T | ||||||||
F25C8.3d.1:c.9632A>T | ||||||||
HGVSg | CHROMOSOME_V:g.20898034A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||||
Flanking_sequences | GATTAGCGAAACAATTATTATTTTAGCCAA | TCGTACTCCAAATCGTCGATCGACAGAAGC | ||||||
Mapping_target | F25C8 | |||||||
Source_location | 225 | CHROMOSOME_V | 20898003 | 20898003 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006812 | ||||||
Transcript | F25C8.3d.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.03 | deleterious | ||||||
PolyPhen | 0.447 | benign | ||||||
HGVSc | F25C8.3d.1:c.9632A>T | |||||||
HGVSp | CE43592:p.Asn3211Ile | |||||||
cDNA_position | 9632 | |||||||
CDS_position | 9632 | |||||||
Protein_position | 3211 | |||||||
Exon_number | 36/37 | |||||||
Codon_change | aAt/aTt | |||||||
Amino_acid_change | N/I | |||||||
F25C8.3b.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.04 | deleterious | ||||||
PolyPhen | 0.447 | benign | ||||||
HGVSc | F25C8.3b.1:c.9455A>T | |||||||
HGVSp | CE47117:p.Asn3152Ile | |||||||
cDNA_position | 9708 | |||||||
CDS_position | 9455 | |||||||
Protein_position | 3152 | |||||||
Exon_number | 34/36 | |||||||
Codon_change | aAt/aTt | |||||||
Amino_acid_change | N/I | |||||||
F25C8.3e.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.04 | deleterious_low_confidence | ||||||
PolyPhen | 0.447 | benign | ||||||
HGVSc | F25C8.3e.1:c.9323A>T | |||||||
HGVSp | CE47428:p.Asn3108Ile | |||||||
cDNA_position | 9323 | |||||||
CDS_position | 9323 | |||||||
Protein_position | 3108 | |||||||
Exon_number | 32/34 | |||||||
Codon_change | aAt/aTt | |||||||
Amino_acid_change | N/I | |||||||
F25C8.3c.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.03 | deleterious | ||||||
PolyPhen | 0.447 | benign | ||||||
HGVSc | F25C8.3c.1:c.9428A>T | |||||||
HGVSp | CE47217:p.Asn3143Ile | |||||||
cDNA_position | 9428 | |||||||
CDS_position | 9428 | |||||||
Protein_position | 3143 | |||||||
Exon_number | 34/35 | |||||||
Codon_change | aAt/aTt | |||||||
Amino_acid_change | N/I | |||||||
F25C8.3a.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.03 | deleterious | ||||||
PolyPhen | 0.447 | benign | ||||||
HGVSc | F25C8.3a.1:c.9518A>T | |||||||
HGVSp | CE41563:p.Asn3173Ile | |||||||
cDNA_position | 9518 | |||||||
CDS_position | 9518 | |||||||
Protein_position | 3173 | |||||||
Exon_number | 35/37 | |||||||
Codon_change | aAt/aTt | |||||||
Amino_acid_change | N/I | |||||||
Method | WGS_Flibotte |