WormBase Tree Display for Variation: WBVar02005353
expand all nodes | collapse all nodes | view schema
WBVar02005353 | Name | Public_name | WBVar02005353 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00732945 | |||||||
F15A2.6b.1:c.*20-49_*20-47del | ||||||||
F15A2.6a.1:c.2495-49_2495-47del | ||||||||
HGVSg | CHROMOSOME_X:g.13489016_13489018del | |||||||
Sequence_details | SMap | S_parent | Sequence | F15A2 | ||||
Flanking_sequences | TAGAATATAGTGGGTAATAACGAGTAAGCT | CTACTACTATGGTTGATTGGATTATTGATT | ||||||
Mapping_target | F15A2 | |||||||
Source_location | 225 | CHROMOSOME_X | 13488946 | 13488948 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004719 | ||||||
Transcript | F15A2.6b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F15A2.6b.1:c.*20-49_*20-47del | |||||||
Intron_number | 17/18 | |||||||
F15A2.6a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F15A2.6a.1:c.2495-49_2495-47del | |||||||
Intron_number | 15/17 | |||||||
Method | WGS_Flibotte |