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WormBase Tree Display for Variation: WBVar02020180

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Name Class

WBVar02020180NamePublic_nameWBVar02020180
Other_namecewivar00748688
Y54G2A.2a.1:c.1312-43del
Y54G2A.2c.1:c.475-43del
Y54G2A.2b.1:c.1312-43del
HGVSgCHROMOSOME_IV:g.2795611del
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTTTTCTATAATATATAAACATATAATTTTTTTTAAAAAATCAAAAAATTATAATTTGTC
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV27956092795609From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021868
TranscriptY54G2A.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.2c.1:c.475-43del
Intron_number3/4
Y54G2A.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.2a.1:c.1312-43del
Intron_number9/11
Y54G2A.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.2b.1:c.1312-43del
Intron_number9/11
MethodWGS_Flibotte