WormBase Tree Display for Variation: WBVar02044299
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WBVar02044299 | Name | Public_name | WBVar02044299 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00773412 | |||||||
F25C8.3c.1:c.42-142del | ||||||||
F25C8.3d.1:c.96-142del | ||||||||
F25C8.3e.1:c.96-142del | ||||||||
F25C8.3b.1:c.96-142del | ||||||||
F25C8.3a.1:c.96-142del | ||||||||
HGVSg | CHROMOSOME_V:g.20880520del | |||||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||||
Flanking_sequences | GATAATCTATCTCATTTAGACCTTTTTGAC | AAAGTTGTCAAAAAAGGCACATTCAATAAA | ||||||
Mapping_target | F25C8 | |||||||
Source_location | 225 | CHROMOSOME_V | 20880489 | 20880489 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006812 | ||||||
Transcript | F25C8.3d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3d.1:c.96-142del | |||||||
Intron_number | 1/36 | |||||||
F25C8.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3b.1:c.96-142del | |||||||
Intron_number | 2/35 | |||||||
F25C8.3e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3e.1:c.96-142del | |||||||
Intron_number | 1/33 | |||||||
F25C8.3c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3c.1:c.42-142del | |||||||
Intron_number | 1/34 | |||||||
F25C8.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F25C8.3a.1:c.96-142del | |||||||
Intron_number | 1/36 | |||||||
Method | WGS_Flibotte |