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WormBase Tree Display for Variation: WBVar02047092

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Name Class

WBVar02047092NamePublic_nameWBVar02047092
Other_namecewivar00776245
CE48813:p.Ala3dup
CE48099:p.Ala37dup
Y54G2A.17a.1:c.-39+2976_-39+2978dup
Y54G2A.5c.1:c.4_5insCGG
CE33889:p.Ala21dup
Y54G2A.5a.1:c.106_107insCGG
Y54G2A.5b.1:c.58_59insCGG
HGVSgCHROMOSOME_IV:g.2887421_2887422insCGG
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCGGAGCAATTAGCCGGGCTCAACGAGATGCCGGCGCCAGCAGTAGCAGCTCAAAGCATCG
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28874192887420From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionCGG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022868From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1VEP_consequenceinframe_insertion
VEP_impactMODERATE
HGVScY54G2A.5b.1:c.58_59insCGG
HGVSpCE33889:p.Ala21dup
cDNA_position155-156
CDS_position58-59
Protein_position20
Exon_number3/6
Codon_changeccg/cCGGcg
Amino_acid_changeP/PA
Y54G2A.5c.1VEP_consequenceinframe_insertion
VEP_impactMODERATE
HGVScY54G2A.5c.1:c.4_5insCGG
HGVSpCE48813:p.Ala3dup
cDNA_position4-5
CDS_position4-5
Protein_position2
Exon_number1/3
Codon_changeccg/cCGGcg
Amino_acid_changeP/PA
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+2976_-39+2978dup
Intron_number1/8
Y54G2A.5a.1VEP_consequenceinframe_insertion
VEP_impactMODERATE
HGVScY54G2A.5a.1:c.106_107insCGG
HGVSpCE48099:p.Ala37dup
cDNA_position122-123
CDS_position106-107
Protein_position36
Exon_number3/6
Codon_changeccg/cCGGcg
Amino_acid_changeP/PA
MethodWGS_Flibotte