WormBase Tree Display for Variation: WBVar02085461
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WBVar02085461 | Name | Public_name | WBVar02085461 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00815166 | |||||||
Y41C4A.4g.1:c.973+166_973+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||||
Y41C4A.4d.1:c.682+166_682+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||||
Y41C4A.4f.1:c.256+166_256+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||||
Y41C4A.4c.1:c.631+166_631+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||||
Y41C4A.4a.1:c.664+166_664+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||||
Y41C4A.4e.1:c.607+166_607+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||||
Y41C4A.4b.1:c.670+166_670+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||||
HGVSg | CHROMOSOME_III:g.11691674_11691706delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Sequence_details | SMap | S_parent | Sequence | Y41C4A | ||||
Flanking_sequences | ATTCATGATTAATAGAACAGAATTTTTTTT | CGCTAATGAATAATTAAACGAAAAATTAAA | ||||||
Mapping_target | Y41C4A | |||||||
Source_location | 225 | CHROMOSOME_III | 11691574 | 11691606 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTAATTTTTTAAACTGTGTTTCACAGAGTAATC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000793 | ||||||
Transcript | Y41C4A.4e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4e.1:c.607+166_607+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Intron_number | 6/8 | |||||||
Y41C4A.4g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4g.1:c.973+166_973+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Intron_number | 4/6 | |||||||
Y41C4A.4b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4b.1:c.670+166_670+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Intron_number | 5/6 | |||||||
Y41C4A.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4a.1:c.664+166_664+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Intron_number | 6/8 | |||||||
Y41C4A.4d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4d.1:c.682+166_682+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Intron_number | 6/8 | |||||||
Y41C4A.4f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4f.1:c.256+166_256+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Intron_number | 3/5 | |||||||
Y41C4A.4c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4c.1:c.631+166_631+198delinsTTAATTTTTTAAACTGTGTTTCACAGAGTAATC | |||||||
Intron_number | 5/6 | |||||||
Method | WGS_Flibotte |